dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003383_5|CGC1
Gene ID: MGYG000003383_00202
Location and strand information: 134462 - 136102 (+)
Family: 3.A.1.5.35
Protein type: TC
Protein description: Oligopeptide-binding protein OppA

Gene clsuter ID: MGYG000003383_5|CGC1
Gene ID: MGYG000003383_00204
Location and strand information: 137659 - 139047 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003383_5|CGC1
Gene ID: MGYG000003383_00205
Location and strand information: 139131 - 140054 (+)
Family: 3.A.1.1.48
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000003383_5|CGC1
Gene ID: MGYG000003383_00206
Location and strand information: 140058 - 140954 (+)
Family: 3.A.1.1.48
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000003383_5|CGC1
Gene ID: MGYG000003383_00207
Location and strand information: 140986 - 142164 (+)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 5.3119
Protein molecular weight: 44419.84
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003383_5|CGC1
Gene ID: MGYG000003383_00208
Location and strand information: 142125 - 142487 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003383_5|CGC1
Gene ID: MGYG000003383_00209
Location and strand information: 142553 - 143638 (+)
Family: LacI
Protein type: TF
Protein description: Catabolite control protein A

Gene clsuter ID: MGYG000003383_5|CGC1
Gene ID: MGYG000003383_00210
Location and strand information: 143842 - 145389 (+)
Family: GH51
Protein type: CAZyme
Protein description: Exo-alpha-(1->6)-L-arabinofuranosidase
Protein isoelectric point: 4.5164
Protein molecular weight: 56119.79
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003383_5|CGC1
Gene ID: MGYG000003383_00211
Location and strand information: 145448 - 146401 (+)
Family: 8.A.5.1.3
Protein type: TC
Protein description: Oxidoreductase YdhF

Gene clsuter ID: MGYG000003383_5|CGC1
Gene ID: MGYG000003383_00212
Location and strand information: 147325 - 148596 (+)
Family: GH39
Protein type: CAZyme
Protein description: Beta-xylosidase
Protein isoelectric point: 4.9955
Protein molecular weight: 46706.24
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003383_00202	Oligopeptide-binding protein OppA	TC	134462	136102	+	3.A.1.5.35
MGYG000003383_00204	hypothetical protein	STP	137659	139047	+	SBP_bac_1
MGYG000003383_00205	Lactose transport system permease protein LacF	TC	139131	140054	+	3.A.1.1.48
MGYG000003383_00206	L-arabinose transport system permease protein AraQ	TC	140058	140954	+	3.A.1.1.48
MGYG000003383_00207	Intracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	140986	142164	+	GH51
MGYG000003383_00208	hypothetical protein	null	142125	142487	+	No domain
MGYG000003383_00209	Catabolite control protein A	TF	142553	143638	+	LacI
MGYG000003383_00210	Exo-alpha-(1->6)-L-arabinofuranosidase	CAZyme	143842	145389	+	GH51
MGYG000003383_00211	Oxidoreductase YdhF	TC	145448	146401	+	8.A.5.1.3
MGYG000003383_00212	Beta-xylosidase	CAZyme	147325	148596	+	GH39
Protein ID	Protein Name	Type	Start	End	Strand	Signature